Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865856.1_cds_XP_016432508.1_28748
CDS Infomation

[gene=LOC107759148] [db_xref=GeneID:107759148] [protein=SPX domain-containing membrane protein At4g22990-like isoform X2] [protein_id=XP_016432508.1] [location=complement(join(113065..113303,114248..114381,115018..115208,116108..116277,116771..117072,117899..118353,118484..118588,118885..119196,119962..120082,120757..120809))] [gbkey=CDS]
Sequence

ATGGTTGCTTTTGGGAAGAAGTTGAAGGAAAGGCAAATCGTGGAATGGCAAGGATACTAT
ATCAATTACAAAGTAATGAAGAAGAAGGTAAAGCAATACGCTGATCAAATCCAGGCTGGA
GCACTCAATCAGCGATATGTTCTTAAGGATTTCTCAAGGATGCTGGACAAGGAGATTGAG
AAAGTTGTTCTGTTTTTGTTGGAACAACAAGGAGTACTTGCAAGCAGGATATCTGAACTC
AATGAACAGCAAGATTCTCTTCAAGAACAGCCTGATCTATCCAAAGTAACTGAGCTACGA
GAAGGCTATAGATATGTGGGGCGTGATCTTTTAAAGCTTCTTTTTTTTGTTGAAATAAAT
GCCATTGGATTGCGGAAGATCCTTAAGAAATTTGACAAACGTTTTGGCTATAGATTCACT
GATTACTATGTCAAAACCCGGGCAAATCATCCATATTCCCAACTTCAGCAAGTCTTCAAG
CATGTGGGATTAGGGGCAGTTGTTGGAGCAATATCTCGTAATCTTGCAGACCTTCAAGAC
CGTGAAGGAAGCTACTTGTCAATTTATGATCAGCCTGCTCTTCCACTTCAGGAGCCCGTC
GTTGATGCAATGGAAGCAGCTATTGATAGATTAGGTTACTCAACTACCTTCCTTAACTTT
TCGGTCCAACGTTCACTAATCATGCTAGAAGAGTTACCTACTCCTGTTGAGGAACATGTT
GATGATCAGAGATACCATTTTATGTCACTCCTCTTGAACCTGGCAAATACATTCCTTTAT
ATGATCAATACATATATCGTTGTTCCAACAGCTGATGATTATTCTATGAGCCTTGGTGCT
GCGGCGACAGTTTGTGGAATTGTGATTGGAGCCATGGCTGTTGCGCAGGTCTTTTCTTCT
GTGTATTTCAGTGCCTGGTCAAACAGGTCTTACTTCAGACCTCTGGTATTTAGCAGTATA
GTTCTTTTTGTGGGGAATGTGATGTATGCATTGGCCTATGATCTCAAATCAATACCAATT
CTCCTTCTCGGTCGTATATTTTGCGGTTTGGGTTCCGCCAGAGCAGTGAACCGACGTTAC
ATCAGTGACTGTGTGCCACTTAAAATCCGGATGCAGGCTTCAGCAGGTTTTGTAAGTGCT
AGTGCACTTGGAATGGCATGTGGCCCTGCAATTGCTGGGCTACTTCAGACAAATTTTAAG
ATTTACAAGTTAACATTCAATCAAGATACTTTGCCTGGTTGGGTTATGGCTCTTTCATGG
TTAATCTATTTGGTATGGTTGTGGATCTCTTTTAGAGAACCTGCTCAAGAGACTGAAGCA
AACAATGTTCCTCGGAAATCTAATGCTGAAAACGATGCCCTTGAAAAAGGTGTTGTGCAA
CCATTGCTATTAAAATCAGCGGATGATGAACAAGAAAATGAAGGTGAATGTGATGGCAGT
GAAGAAGCTCCCGAGGAGTCTCGTCGTCCAGCCAACTCCATTGTAGAAGCATATAGATTG
CTGACTCCTTCTGTGAAGGTTCAATTATTAATCTATTTTATGCTGAAATATGCTATGGAG
ATTTTACTTTCAGCATCTAGTGTCATCACGGCATATTACTTTAGCTGGTCAACGAGCACT
GTCGCAATTTTTCTTGCATGTCTGGGCCTCACAGTTCTTCCAGTAAATGTTGTTGTTGGG
AGCTACATAAGTAACATCTTTCAGGACAGGCAACTTTTGCTGGCATCTGAAATCATGGTT
TGTCTTGGTATACTCCTGAGCTTTAATGTTATAATCCCGTATTCAGTACCACAGTATGTC
TGCTCAGGCCTCCTAATGTTTGTATCTGCTGAAGTATTAGAAGGTGTAAATTTATCTCTT
CTCTCTCGAGTAATGTCATCAAGGCTTTCCCGGGGAACCTACAATGGAGGTCTCTTGTCC
ACAGAAGCTGGCACAATTGCTCGGGTGATTGCTGATGTAACTATAACTCTTGGTGGATAT
TTAGGGCAGAGCAGGCTCTTGAATGTTACTCTTCTTCCTTCACTTTTGATATGCATAGCT
TGCATTTTTGCAACATGTCGTACCTATAATTCTCTTTACTGA

Peptide Sequence

PEP ID

XP_016432508.1
PEP Infomation

PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X2 [Nicotiana tabacum]
Sequence

MVAFGKKLKERQIVEWQGYYINYKVMKKKVKQYADQIQAGALNQRYVLKDFSRMLDKEIE
KVVLFLLEQQGVLASRISELNEQQDSLQEQPDLSKVTELREGYRYVGRDLLKLLFFVEIN
AIGLRKILKKFDKRFGYRFTDYYVKTRANHPYSQLQQVFKHVGLGAVVGAISRNLADLQD
REGSYLSIYDQPALPLQEPVVDAMEAAIDRLGYSTTFLNFSVQRSLIMLEELPTPVEEHV
DDQRYHFMSLLLNLANTFLYMINTYIVVPTADDYSMSLGAAATVCGIVIGAMAVAQVFSS
VYFSAWSNRSYFRPLVFSSIVLFVGNVMYALAYDLKSIPILLLGRIFCGLGSARAVNRRY
ISDCVPLKIRMQASAGFVSASALGMACGPAIAGLLQTNFKIYKLTFNQDTLPGWVMALSW
LIYLVWLWISFREPAQETEANNVPRKSNAENDALEKGVVQPLLLKSADDEQENEGECDGS
EEAPEESRRPANSIVEAYRLLTPSVKVQLLIYFMLKYAMEILLSASSVITAYYFSWSTST
VAIFLACLGLTVLPVNVVVGSYISNIFQDRQLLLASEIMVCLGILLSFNVIIPYSVPQYV
CSGLLMFVSAEVLEGVNLSLLSRVMSSRLSRGTYNGGLLSTEAGTIARVIADVTITLGGY
LGQSRLLNVTLLPSLLICIACIFATCRTYNSLY

Transcript Sequence

Gene sequence data has not been registered.